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Publications

2018

  • Bakhoum N., Fall D., Fall F., Diouf F., Hirsch A.M., D. Balachandar D., Diouf D. 2018.Senegalia senegal(synonym:Acacia senegal), its importance to sub-Saharan Africa, and its relationship with a wide range of symbiotic soil microorganisms. South African Journal of Botany 119: 362–368.
  • Burgarella, C., Cubry, P., Kane, N.A., Varshney, R.K., Mariac, C., Liu, X., Shi, C.C., Thudi, M., Couderc, M., Xu, X., Chitikineni, A., Scarcelli, N., Barnaud, A., Rhone, B., Dupuy, C., Francois, O., Berthouly-Salazar, C., Vigouroux, Y. 2018. A western Sahara centre of domestication inferred from pearl millet genomes. 2018. NATURE ECOLOGY & EVOLUTION , 2: 1377-1380.
  • Hocher V., Ngom M., Carre-Mlouka A., Tisseyre P., Gherbi H., Svistoonoff S. 2018. Signalling in actinorhizal root nodule symbioses. Antonie van Leeuwenhoek , sous presse.
  • Fall F., Le Roux C., Ba A.M., Fall D., Bakhoum, N., Faye M.N., Kane A., Ndoye I., Diouf D. 2018. The rhizosphere of the halophytic grass Sporobolus robustus Kunth hosts rhizobium genospecies that are efficient on Prosopis juliflora (Sw.) DC and Vachellia seyal (Del.) P.J.H. Hurter seedlings. 2018. S ystematic and applied microbiology , sous presse.
  • Debieu M., Sine B., Passot S., Grondin A., Akata A.E., Gangashetty P., Vadez V., Gantet P., Foncéka, D., Cournac, L., Hash, C.T., Kane N.A., Vigouroux Y., and Laplaze L. 2018. Response to early drought stress and identification of QTLs controlling biomass production under drought in pearl millet.PLoS One , 13(10):e0201635.
  • Ghodhbane-Gtari F., Nouioui I., Hezbri K., Lundstedt E., D'Angelo T., McNutt Z., Laplaze L., Gherbi H., Vaissayre V., Svistoonoff S., Ahmed H.B., Boudabous A., Tisa L.S. 2018. The plant-growth-promoting actinobacteria of the genus Nocardia induces root nodule formation in Casuarina glauca . Antonie van Leeuwenhoek , sous presse.
  • Djighaly P., Diagne N., Ngom M., Ngom D., Hocher V., Fall D., Diouf D., Laplaze L., Svistoonoff S., Champion A. 2018. Selection of arbuscular mycorrhizal fungal strains to improve Casuarina equisetifolia L. and Casuarina glauca Sieb. tolerance to salinity. Ann. For. Sci. , 75: 72.
  • Fall, D, Bakhoum, N, Fall, F, Diouf, F, Ndiaye, C, Faye, MN, Hocher, V, Diouf, D. 2018. Effect of peanut shells amendment on soil properties and growth of seedlings of Senegalia senegal (L.) Britton, Vachellia seyal (Delile) P. Hurter, and Prosopis juliflora (Swartz) DC in salt-affected soils. Ann. Forest Sci. 75: 32.
  • Séne S, Selosse MA, Forget M, Lambourdière J, Cissé K, Diédhiou AG, Rivera-Ocasio E, Kodja H, Kameyama N, Nara K, Vincenot L, Mansot JL, Weber J, Roy M, Sylla SN, Bâ A. 2018. A pantropically introduced tree is followed by specific ectomycorrhizal symbionts due to pseudo-vertical transmission. ISME J . 12: 1806-1816.
  • Passot S, Moreno-Ortega B, Moukouanga D, Balsera C, Guyomarc'h S, Lucas M, Lobet G, Laplaze L, Muller B, Guédon Y. 2018. A new phenotyping pipeline reveals three types of lateral roots and a random branching pattern in two cereals. Plant Physiol.   177: 896-910.
  • Laplaze L, Sparvoli F, Masmoudi K, Hash CT. 2018. Editorial: Harvesting Plant and Microbial Biodiversity for Sustainably Enhanced Food Security. Front. Plant Sci. 9:42.

2017

  • Debieu M, Kanfany G. and Laplaze L. 2017. Pearl millet genome: lessons from a tough crop. Trends in Plant Science , sous presse.
  • Ndour A., Vadez V., Pradal C and Lucas M. 2017. Virtual Plants Need Water Too: Functional-Structural Root System Models in the Context of Drought Tolerance Breeding". Frontiers in Plant Sciences , sous presse.
  • Varshney R. et al. 2017. Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments. Nature Biotech. , sous presse.
  • Glato K, Aïdam A, Kane N A, Diallo B Couderc M, Zékraoui L, Scarcelli N, Barnaud A, Vigouroux Y. 2017. Structure of sweet potato (Ipomoea batatas) diversity in West Africa is partly explained by a climatic gradient. Plos One , sous presse.
  • Oshone R, Ngom M, Chu F, Mansour S, Sy MO, Champion A, Tisa LS. 2017. A comprehensive genomic, transcriptomic, and proteomic approach towards understanding the molecular mechanisms of salt tolerance in Frankia strains isolated from Casuarina trees. BMC Genomics , sous presse.
  • Diagne N, Swanson E, Pesce C, Fall F, Diouf F, Bakhoum N, Fall D, Ndigue Faye M, Oshone R, Simpson S, Morris K, Thomas WK, Moulin L, Diouf D, Tisa LS. 2017. Permanent draft genome sequence of Rhizobium sp. strain LCM 4573, a salt-tolerant, nitrogen-fixing bacterium isolated from Senegalese soils. Genome Announc. 5:e00285-17.
  • Fall F, Diouf D, Fall D, Ndoye I, Ndiaye C, Kane A, Bâ AM. 2017. Growth and physiological responses of Sporobolus robustus Kunth seedlings to salt stress. Arid Land Research and Management 31 (1), 46-56.
  • Rhoné B., Mariac C., Couderc M., Berthouly-Salazar C., Salia Ousseini I., Vigouroux Y. 2017. No excess of cis-regulatory variation associated with intra-specific selection in wild pearl millet (Cenchrus americanus ). Genome Biol Evol . 9:388-397.
  • Ousseini IS, Bakasso Y, Kane NA, Couderc M, Zekraoui L, Mariac C, Manicacci D, Rhoné B, Barnaud A, Berthouly-Salazar C, Assoumane A, Moussa D, Moussa T, Vigouroux Y. 2017. Myosin XI is associated with fitness and adaptation to aridity in wild pearl millet. Heredity , sous presse.
  • Diack O, Kane NA, Berthouly-Salazar C, Gueye MC, Diop BM, Fofana A, Sy O, Tall H, Zekraoui L, Piquet M, Couderc M, Vigouroux Y, Diouf D and Barnaud A. 2017. New Genetic Insights into Pearl Millet Diversity As Revealed by Characterization of Early- and Late-Flowering Landraces from Senegal. Front. Plant Sci. 8:818.
  • Diagne N, Swanson E, Pesce C, Fall F, Diouf F, Bakhoum N, Fall D, Ndigue Faye M, Oshone R, Simpson S, Morris K, Thomas WK, Moulin L, Diouf D, Tisa LS. 2017. Permanent Draft Genome Sequence of Rhizobium sp. Strain LCM 4573, a Salt-Tolerant, Nitrogen-Fixing Bacterium Isolated from Senegalese Soils. Genome Announc. 4;5(18). pii: e00285-17.
  • Diagne N, Swanson E, Pesce C, Fall F, Diouf F, Bakhoum N, Fall D, Ndigue Faye M, Oshone R, Simpson S, Morris K, Thomas WK, Moulin L, Diouf D, Tisa LS. 2017. Permanent Draft Genome Sequence of Ensifer sp. Strain LCM 4579, a Salt-Tolerant, Nitrogen-Fixing Bacterium Isolated from Senegalese Soil. Genome Announc. 6;5(14). pii: e00117-17.
  • Thioye B, de Faria SM, Kane A, Ndiaye C, Soule OA, Fall D, Duponnois R, Sylla SN, Bâ A. 2017. Growth response of different specie s of Ziziphus to inoculation with arbuscular mycorrhizal fungi. Fruits 72:174–181

2016

  • Ngom, A., Mbaye, M. S., Barnaud, A., Kane, A., Ba, N., Gueye, M., et al. 2016. Révision du genre Digitaria Haller (Poaceae ) au Sénégal: proposition d’une clé de détermination pour une meilleure identification des espèces. International Journal of Biological and Chemical Sciences 10(1), 58-86.
  • Fall D, Bakhoum N, Fall F, Diouf F, Ly MO, Diouf M, Hocher V, Diouf D (2016). Germination, growth and physiological responses of Senegalia senegal (L.) Britton, Vachellia seyal (Delile) P. Hurter and Prosopis juliflora (Swartz) DC to salinity stress in greenhouse conditions. African Journal of Biotechnology 15(37): 2017-2027.
  • Fall D, Bakhoum N, Sall SN, Zoubeirou AM, Sylla SN, Diouf D. 2016. Rhizobial inoculation increases soil microbial functioning and gum arabic production of 13-years old Senegalia senegal (L.) Britton, trees in the North part of Senegal. Front. Plant Sci. 7:1355.
  • Bakhoum N, Odee DW, Fall D, Ndoye F, Kane A, Kimiti JM, Zoubeirou AM, Sylla SN, Noba K, Diouf D 2016. Senegalia senegal response to inoculation with rhizobial strains vary in relation to seed provenance and soil type. Plant and Soil 398: 181-193.
  • Ndoye, F., Diedhiou, A. G., Gueye, M., Fall, D., Barnaud, A., Sy, M. O., et al. 2016. Réponse du fonio blanc (Digitaria exilis Stapf) à l’inoculation avec des champignons mycorhiziens à arbuscules en conditions semi-contrôlées. Journal of Applied Biosciences 103(1): 9784-9799.
  • Berthouly‐Salazar, C., Thuillet, A. C., Rhoné, B., Mariac, C., Ousseini, I. S., Couderc, M., ... & Vigouroux, Y. 2016. Genome scan reveals selection acting on genes linked to stress response in wild pearl millet. Molecular Ecology 25(21), 5500-5512.
  • Hanin M., Ebel C., Ngom M., Laplaze L., and Masmoudi K. 2016. New Insights on plant salt tolerance mechanisms and their potential use for breeding. Front. Plant Sci. 7:1787.
  • Diedhiou A.G., Mbaye F.K., Mbodj D., Ndigue Faye M, Pignoly S., Ndoye I., Djaman K., Gaye S., Kane A., Laplaze L., Manneh B., and Champion A. 2016. Field trials reveal ecotype-specific responses to mycorrhizal inoculation in rice. PLoS One 11(12): e0167014.
  • Cacas JL, Pré M, Pizot M, Cissoko M, Diedhiou I, Jalloul A, Doumas P, Nicole M, Champion A. 2016. GhERF-IIb3 regulates the accumulation of jasmonate and leads to enhanced cotton resistance to blight disease. Mol. Plant Pathol. doi: 10.1111/mpp.12445.
  • Ngom M., Gray K., Diagne N., Oshone R., Fardoux J., Gherbi H., Hocher V., Svistoonoff S., Laplaze L., Tisa L., Sy M.O. and Champion A. 2016. Symbiotic performance of diverse Frankia strains on salt-stressed Casuarina glauca and Casuarina equisetifolia plants. Front. Plant Sci. 7:1331
  • Selvakesavan R. K., Dhanya N. N., Thushara P., Abraham S. M., Jayaraj R. S. C., Balasubramanian A., Deeparaj B., Sudha S., Sowmiya Rani K. S., Bachpai V. K. W., Ganesh D., Diagne N., Laplaze L., Gherbi H., Svistoonoff S., Hocher V., Franche C., Bogusz D., Nambiar-Veetil M. 2016. Intraspecies variation in sodium partitioning, potassium and proline accumulation under salt stress in Casuarina equisetifolia Forst. Symbiosis 70: 117-127.
  • Passot S, Gnacko F, Moukouanga D, Lucas M, Guyomarc'h M, Moreno Ortega B, Atkinson J, Niang M, Bennett M, Gantet P, Wells D.M., Guédon Y, Vigouroux Y, Verdeil J-L, Muller B and Laplaze L. 2016. Characterization of pearl millet root architecture and anatomy reveals three types of lateral roots. Front. Plant Sci. 7:829.
  • Chabaud M, Gherbi H, Pirolles E, Vaissayre V, Fournier J, Moukouanga D, Franche C, Bogusz D, Tisa LS, Barker DG, Svistoonoff S. 2016. Chitinase-resistant hydrophilic symbiotic factors secreted by Frankia activate both Ca(2+) spiking and NIN gene expression in the actinorhizal plant Casuarina glauca . New Phytol. 209(1):86-93.
  • Lavenus J., Guyomarc’h S., Laplaze L. 2016.  PIN transcriptional regulation shapes root system architecture. Trends in Plant Sciences 21: 175-177.
  • Ngom M., Diagne N., Laplaze L., Champion A., Sy M.O. 2016. Symbiotic ability of diverse Frankia strains on Casuarina glauca plants in hydroponic conditions. Symbiosis 70: 79-86.
  • Ngom M., Oshone R., Diagne N., Cissoko M., Svistoonoff S., Tisa L., Laplaze L., Sy M.O. and Champion A. 2016. Tolerance to environmental stress by the nitrogen-fixing actinobacterium Frankia and its role in actinorhizal plants adaptation. Symbiosis 70: 17-29.
  • Oshone R, Ngom M, Abebe-Akele F, Simpson S, Morris K, Sy MO, Champion A, Thomas W, Tisa L. 2016. Permanent Draft Genome Sequences for Frankia sp. Strain Allo2, a Salt-Tolerant Nitrogen-Fixing Actinobacterium Isolated from the Root Nodules of Allocasuarina. Genome Announc. 4(3).
  • Ngom M, Oshone R, Hurst SG 4th, Abebe-Akele F, Simpson S, Morris K, Sy MO, Champion A, Thomas WK, Tisa LS. 2016. Permanent Draft Genome Sequence for Frankia sp. Strain CeD , a Nitrogen-Fixing Actinobacterium Isolated from the Root Nodules of Casuarina equistifolia Grown in Senegal. Genome Announc. 4(2).
  • Soumare A, Sall SN, Sanon A,  Cissoko M, Hafidi M, Ndoye I, Duponnois R. 2016. Changes in soil pH, polyphenols content and microbial community mediated by Eucalyptus camaldulensis . Applied Ecology and Environmental Research 14(3), 1-19

2015

  • Fall F, Diouf D, Fall D, Ndoye I, Ndiaye C, Kane A, Bâ AM. 2015. Effect of arbuscular mycorrhizal fungal inoculation on growth, and nutrient uptake of the two grass species, Leptochloa fusca (L.) Stapf and Sporobolus robustus Kunth, under greenhouse conditions. African Journal of Biotechnology 4: 2770-2776.
  • Soumare A, Diop T, Manga A, Ndoye I. 2015. Role of arbuscular mycorrhizal fungi and nitrogen fixing bacteria on legume growth under various environmental stresses. International Journal of Biosciences 7: 31-46.
  • Sy O, Fofana A, Cisse N, Noba K, Diouf D, Ndoye I, Sane D, Kane A, Kane ND, Hash CT, Haussman B, and Elwegan E. 2015. Étude de la variabilité agromorphologique de la collection nationale de mils locaux du Sénégal. Journal of Applied Biosciences 87: 8030-8046.
  • Jalloul A, Sayegh M, Champion A, Nicole M. 2015. Bacterial blight of cotton. Phytopathologia Mediterranea 54: 3-20.
  • Clavijo F, Diedhiou I, Vaissayre V, Brottier L, Acolatse J, Moukouanga D, Crabos A, Auguy F, Franche C, Gherbi H,  Champion A, Hocher V, Barker D, Bogusz D, Tisa L, Svistoonoff, S. 2015.  The Casuarina NIN gene is transcriptionally activated throughout Frankia root infection as well as in response to bacterial diffusible signals. New Phytol. 208:3887-903.
  • Laplaze L., Lucas M., Champion A. 2015. Rhizobial root hair infection requires auxin signaling. Trends in Plant Sciences 20: 332-334.
  • Larrieu A., Champion A., Legrand J., Lavenus J., Mast D., Brunoud G., Oh J., Guyomarc’h S., Pizot M., Farmer E.E., Turnbull C., Vernoux T., Bennett M.J., Laplaze L. 2015. A fluorescent hormone biosensor reveals the dynamics of jasmonate signalling in plants. Nature Communications 6: 6043.
  • Fahr M., Laplaze L., El Mzibri M., Doumas P., Bendaou N., Hocher V., Bogusz D. and Smouni A. 2015. Lead tolerance and accumulation in metallicolous and non-metallicolous populations of Hirschfeldia incana . Experimental & Environmental Botany 109:186-192.
  • Diouf F., Diouf D, Klonowska A., Le Queré A., Bakhoum N., Fall D., Neyra M., Parrinello H., Diouf M., Ndoye I., Moulin L. 2015. Genetic and genomic diversity studies of Acacia symbionts in Senegal reveal new species of Mesorhizobium with a putative geographical pattern. Plos One 10(2):e0117667.
  • Champion A., Lucas M., Tromas A., Vaissayre V., Crabos A., Diédhiou I., Prodjinoto H., Moukouanga D., Pirolles E., Cissoko M., Bonneau J., Gherbi H., Franche C., Hocher V., Svistoonoff S. and Laplaze L. 2015. Inhibition of auxin signaling in Frankia -infected cells in Casuarina glauca nodules leads to increased nodulation. Plant Physiology 167: 1149-1157.
  • Ndoye F, Kane A, Diedhiou AG, Bakhoum N, Fall D, Sadio O, Sy MO, Noba K,Diouf D(2015). Effects of dual inoculation with arbuscular mycorrhizal fungi and rhizobia on Acacia senegal (L.) Willd. seedling growth and soil enzyme activities in senegal. International Journal of Biosciences 6 (2), 36-48.
  • Bakhoum N, Galiana A, Le Roux C, Kane A, Duponnois R, Ndoye F, Fall D, Noba K, Sylla SN, Diouf D (2015). Phylogeny of nodulation genes and symbiotic diversity of Acacia senegal (L.) Willd. and A. seyal (Del.) Mesorhizobium strains from different regions of Senegal. Microbial Ecology 69 (3), 641–651.
  • Sène S, Avril R, Chaintreuil C, Geoffroy A, Ndiaye C, Diédhiou AG, Sadio O, Courtecuisse R, Sylla SN, Selosse MA & Bâ AM (2015). Ectomycorrhizal fungal communities of Coccoloba uvifera (L.) L. mature trees and seedlings in the neotropical coastal forests of Guadeloupe (Lesser Antilles). Mycorrhiza 25: 547-559.

2014

  • Bakhoum N, Le Roux C, Diouf D, Kane A, Ndoye F, Fall D, Duponnois R, Noba K, Galiana A. (2014) Distribution and diversity of rhizobial populations from Senegalese arid and semi-arid zones associated to different Acacia senegal (L.) Willd. provenances. Open Journal of Forestry 4: 136-143.
  • Diédhiou I., Tromas A., Cissoko M., Gray K., Parizot B., Crabos A., Alloisio N., Fournier P., Carro L., Svistoonoff S., Gherbi H., Hocher V., Diouf D., Laplaze L. and Champion A. 2014. Identification of potential transcriptional regulators of actinorhizal symbioses in Casuarina glauca and Alnus glutinosa . BMC Plant Biology 14: 342.
  • Ahmadi N., Audebert A., Bennett M.J., Bishopp A., Costa de Oliveira A., Courtois B., Diedhiou A., Diévart A., Gantet P., Ghesquière A., Guiderdoni E., Henry A., Inukai Y., Kochian L., Laplaze L., Lucas M., Luu D.T., Manneh B., Mo X., Muthurajan R., Périn C., Price A., Robin S., Sentenac H., Sine B, Uga Y., Véry A.A., Wissuwa M., Wu P., Xu J. 2014. The roots of future rice harvests. Rice 7: 29.
  • S. Idi Saidou, Y. Bakasso, M. M. Inoussa., M.  Zaman-Allah, A. Sanoussi, A. Barnaud, M. Saadou, C. Billot. 2014.  Diversité agro-morphologique des accessions de Fonio [Digitaria exilis (Kippist.) Stapf.] au Niger. International Journal of Biological and Chemical Sciences 8(4): 111407.
  • B.  Ouattara, K. N. Ndir, M. C. Gueye, I. Diédhiou, A. Barnaud, D. Fonceka, N. Cissé, E. L. Akpo, D. Diouf. 2014. Genetic diversity of Jatropha curcas L. in Senegal compared with exotic accessions based on microsatellite markers. Genetic Resources and Crop Evolution 2014, 61(6): 1039-1045.
  • Soumare A., Manga A., Fall S., Hafidi M., Ndoye I., and Duponnois R. 2014. Effect of Eucalyptus camaldulensis amendment on soil chemical properties, enzymatic activity, Acacia species growth and roots symbioses. Agroforest Syst. 89: 97-106.
  • Imanishi L., Perrine-Walker F., Ndour A., Vayssieres A., Conejero G., Lucas M., Champion A., Laplaze L., Wall L. and Svistoonoff S. 2013. Role of auxin during intercellular infection of Discaria trinervis by Frankia . Front. Plant Sci. 5:399.
  • Mariac C, Scarcelli N, Pouzadou J, Barnaud A, Billot C, Faye A, Kougbeadjo A, Maillol V, Martin G, Sabot F, Santoni S, Vigouroux Y, Couvreur TL. 2014. Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics and phylogeography studies. Mol. Ecol. Resour. 14(6): 1103–1113.

2013

  • Soumare A., Diop T., Lahcen O., Bassene G. , Duponnois R., and Ndoye I. 2013. Impact de Eucalyptus camaldulensis sur la diversité des rhizobiums associés à Acacia senegal et A. seyal au Sénégal. Journal of Applied Biosciences 67:5183– 5193.
  • Diagne N., Arumugam K., Ngom M., Nambiar-Veetil M., Franche C., Narayanan K.K., and Laplaze L. 2013. Use of Frankia and actinorhizal plants for degraded lands reclamation. BioMed Research International 2013: 948258.
  • Thiam M., Champion A., Diouf D., and SY M.O. 2013. NaCl Effects on In Vitro Germination and Growth of Some Senegalese Cowpea (Vigna unguiculata (L.) Walp.) Cultivars. ISRN Biotechnology Article ID 382417.
  • Fahr M., Laplaze L., Bendaou N., Hocher V., El Mzibri M., Bogusz D. and Smouni A. 2013. Effect of lead on root growth. Front. Plant Sci. 4:175.
  • Auguy F., Fahr M., Moulin P., Brugel A., Laplaze L., El Mzibri M., Filali-Maltouf A., Doumas P. and Smouni A. 2013. Lead tolerance and accumulation in Hirschfeldia incana , a Mediterranean Brassicaceae from metalliferous mine spoils. PLoS One 8(5): e61932.
  • Wells D.M., Laplaze L., Bennett M., and Vernoux T. 2013. Biosensors for phytohormone quantification: challenges, solutions and opportunities. Trends in Plant Sciences 18(5): 244-249.

Laboratoire mixte international Adaptation des Plantes et microorganismes associés au Stress Environnementaux (LAPSE)